Index

A

add_edge() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) (xgi.core.simplicialcomplex.SimplicialComplex method) add_edges_from() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) (xgi.core.simplicialcomplex.SimplicialComplex method) add_node() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) add_node_to_edge() (xgi.core.hypergraph.Hypergraph method) (xgi.core.simplicialcomplex.SimplicialComplex method) add_nodes_from() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) add_simplex() (xgi.core.simplicialcomplex.SimplicialComplex method) add_simplices_from() (xgi.core.simplicialcomplex.SimplicialComplex method) add_weighted_edges_from() (xgi.core.hypergraph.Hypergraph method) (xgi.core.simplicialcomplex.SimplicialComplex method) add_weighted_simplices_from() (xgi.core.simplicialcomplex.SimplicialComplex method) adjacency_matrix() (in module xgi.linalg.hypergraph_matrix) argmax() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) argmin() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) argsort() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method)

asdict() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) ashist() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) aslist() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) asnumpy() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) aspandas() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) attrs() (in module xgi.stats.diedgestats) (in module xgi.stats.dinodestats) (in module xgi.stats.edgestats) (in module xgi.stats.nodestats) average_neighbor_degree() (in module xgi.stats.nodestats)

B

barycenter_kamada_kawai_layout() (in module xgi.drawing.layout)

barycenter_spring_layout() (in module xgi.drawing.layout) boundary_matrix() (in module xgi.linalg.hodge_matrix)

C

chung_lu_hypergraph() (in module xgi.generators.random) circular_layout() (in module xgi.drawing.layout) cleanup() (xgi.core.hypergraph.Hypergraph method) (xgi.core.simplicialcomplex.SimplicialComplex method) clear() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) clear_edges() (xgi.core.hypergraph.Hypergraph method) clique_eigenvector_centrality() (in module xgi.algorithms.centrality) (in module xgi.stats.nodestats) clique_motif_matrix() (in module xgi.linalg.hypergraph_matrix) close() (xgi.core.simplicialcomplex.SimplicialComplex method)

clustering_coefficient() (in module xgi.algorithms.clustering) (in module xgi.stats.nodestats) complement() (in module xgi.generators.classic) complete_hypergraph() (in module xgi.generators.classic) compute_kuramoto_order_parameter() (in module xgi.dynamics.synchronization) compute_simplicial_order_parameter() (in module xgi.dynamics.synchronization) connected_components() (in module xgi.algorithms.connected) convert_labels_to_integers() (in module xgi.utils.utilities) copy() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) (xgi.core.simplicialcomplex.SimplicialComplex method)

D

dcsbm_hypergraph() (in module xgi.generators.random) degree() (in module xgi.stats.dinodestats) (in module xgi.stats.nodestats) degree_assortativity() (in module xgi.algorithms.assortativity) degree_counts() (in module xgi.algorithms.properties) degree_histogram() (in module xgi.algorithms.properties) degree_matrix() (in module xgi.linalg.hypergraph_matrix) density() (in module xgi.algorithms.properties) dict_to_hypergraph() (in module xgi.convert.hypergraph_dict) DiEdgeStat (class in xgi.stats) diedgestat_func() (in module xgi.stats) DiEdgeView (class in xgi.core.diviews) DiHypergraph (class in xgi.core.dihypergraph) DiIDView (class in xgi.core.diviews) dimembers() (xgi.core.diviews.DiEdgeView method) dimemberships() (xgi.core.diviews.DiNodeView method) DiNodeStat (class in xgi.stats)

dinodestat_func() (in module xgi.stats) DiNodeView (class in xgi.core.diviews) double_edge_swap() (xgi.core.hypergraph.Hypergraph method) download_xgi_data() (in module xgi.readwrite.xgi_data) draw() (in module xgi.drawing.draw) draw_bipartite() (in module xgi.drawing.draw) draw_directed_dyads() (in module xgi.drawing.draw) draw_hyperedge_labels() (in module xgi.drawing.draw) draw_hyperedges() (in module xgi.drawing.draw) draw_multilayer() (in module xgi.drawing.draw) draw_node_labels() (in module xgi.drawing.draw) draw_nodes() (in module xgi.drawing.draw) draw_simplices() (in module xgi.drawing.draw) draw_undirected_dyads() (in module xgi.drawing.draw) dual() (xgi.core.hypergraph.Hypergraph method) dual_dict() (in module xgi.utils.utilities) duplicates() (xgi.core.views.IDView method) dynamical_assortativity() (in module xgi.algorithms.assortativity)

E

edge_neighborhood() (in module xgi.algorithms.properties) edge_positions_from_barycenters() (in module xgi.drawing.layout) edges (xgi.core.dihypergraph.DiHypergraph property) (xgi.core.hypergraph.Hypergraph property) EdgeStat (class in xgi.stats)

edgestat_func() (in module xgi.stats) EdgeView (class in xgi.core.views) empirical_subsets_filter() (in module xgi.convert.encapsulation_dag) (in module xgi.encapsulation_dag) empty_hypergraph() (in module xgi.generators.classic) empty_simplicial_complex() (in module xgi.generators.classic)

F

filterby() (xgi.core.diviews.DiIDView method) (xgi.core.views.IDView method) filterby_attr() (xgi.core.diviews.DiIDView method) (xgi.core.views.IDView method) find_triangles() (in module xgi.utils.utilities) flag_complex() (in module xgi.generators.simplicial_complexes) flag_complex_d2() (in module xgi.generators.simplicial_complexes) freeze() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) (xgi.core.simplicialcomplex.SimplicialComplex method)

from_bipartite_edgelist() (in module xgi.convert.bipartite_edges) from_bipartite_graph() (in module xgi.convert.bipartite_graph) from_bipartite_pandas_dataframe() (in module xgi.convert.pandas) from_hyperedge_dict() (in module xgi.convert.hyperedges) from_hyperedge_list() (in module xgi.convert.hyperedges) from_incidence_matrix() (in module xgi.convert.incidence) from_max_simplices() (in module xgi.convert.simplex) from_simplex_dict() (in module xgi.convert.simplex) from_view() (xgi.core.diviews.DiIDView class method) (xgi.core.views.IDView class method)

G

generate_bipartite_edgelist() (in module xgi.readwrite.bipartite)

generate_edgelist() (in module xgi.readwrite.edgelist)

H

h_eigenvector_centrality() (in module xgi.algorithms.centrality) (in module xgi.stats.nodestats) has_simplex() (xgi.core.simplicialcomplex.SimplicialComplex method) head() (xgi.core.diviews.DiEdgeView method)

head_order() (in module xgi.stats.diedgestats) head_size() (in module xgi.stats.diedgestats) hist() (in module xgi.utils.utilities) hodge_laplacian() (in module xgi.linalg.hodge_matrix) Hypergraph (class in xgi.core.hypergraph)

I

IDDict (class in xgi.utils.utilities) ids (xgi.core.diviews.DiIDView property) (xgi.core.views.IDView property) IDView (class in xgi.core.views) in_degree() (in module xgi.stats.dinodestats) incidence_density() (in module xgi.algorithms.properties) incidence_matrix() (in module xgi.linalg.hypergraph_matrix) intersection_profile() (in module xgi.linalg.hypergraph_matrix)

is_connected() (in module xgi.algorithms.connected) is_frozen (xgi.core.dihypergraph.DiHypergraph property) (xgi.core.hypergraph.Hypergraph property) (xgi.core.simplicialcomplex.SimplicialComplex property) is_possible_order() (in module xgi.algorithms.properties) is_uniform() (in module xgi.algorithms.properties) isolates() (xgi.core.diviews.DiNodeView method) (xgi.core.views.NodeView method)

K

katz_centrality() (in module xgi.algorithms.centrality)

L

laplacian() (in module xgi.linalg.laplacian_matrix) largest_connected_component() (in module xgi.algorithms.connected) largest_connected_hypergraph() (in module xgi.algorithms.connected) line_vector_centrality() (in module xgi.algorithms.centrality)

load_bigg_data() (in module xgi.readwrite.bigg_data) load_xgi_data() (in module xgi.readwrite.xgi_data) local_clustering_coefficient() (in module xgi.algorithms.clustering) (in module xgi.stats.nodestats) lookup() (xgi.core.views.IDView method)

M

max() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) max_edge_order() (in module xgi.algorithms.properties) maximal() (xgi.core.views.EdgeView method) mean() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) median() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) members() (xgi.core.diviews.DiEdgeView method) (xgi.core.views.EdgeView method) memberships() (xgi.core.diviews.DiNodeView method) (xgi.core.views.NodeView method) merge_duplicate_edges() (xgi.core.hypergraph.Hypergraph method) min() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) min_where() (in module xgi.utils.utilities) module xgi.algorithms.assortativity xgi.algorithms.centrality xgi.algorithms.clustering xgi.algorithms.connected xgi.algorithms.properties xgi.algorithms.shortest_path xgi.convert.bipartite_edges xgi.convert.bipartite_graph xgi.convert.encapsulation_dag xgi.convert.graph xgi.convert.higher_order_network xgi.convert.hyperedges xgi.convert.hypergraph_dict xgi.convert.incidence xgi.convert.line_graph xgi.convert.pandas xgi.convert.simplex xgi.core.dihypergraph xgi.core.diviews xgi.core.globalviews xgi.core.hypergraph xgi.core.simplicialcomplex xgi.core.views xgi.drawing.draw xgi.drawing.layout xgi.dynamics.synchronization xgi.encapsulation_dag xgi.generators.classic xgi.generators.lattice xgi.generators.random xgi.generators.randomizing xgi.generators.simple xgi.generators.simplicial_complexes xgi.generators.uniform xgi.linalg.hodge_matrix xgi.linalg.hypergraph_matrix xgi.linalg.laplacian_matrix xgi.readwrite.bigg_data xgi.readwrite.bipartite xgi.readwrite.edgelist xgi.readwrite.incidence xgi.readwrite.json xgi.readwrite.xgi_data xgi.stats xgi.stats.diedgestats xgi.stats.dinodestats xgi.stats.edgestats xgi.stats.nodestats xgi.utils.utilities

moment() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) MultiDiEdgeStat (class in xgi.stats) MultiDiNodeStat (class in xgi.stats) MultiEdgeStat (class in xgi.stats) MultiNodeStat (class in xgi.stats) multiorder_laplacian() (in module xgi.linalg.laplacian_matrix)

N

name (xgi.stats.DiEdgeStat property) (xgi.stats.EdgeStat property) (xgi.stats.MultiDiEdgeStat property) (xgi.stats.MultiDiNodeStat property) (xgi.stats.MultiEdgeStat property) (xgi.stats.MultiNodeStat property) (xgi.stats.NodeStat property) neighbors() (xgi.core.views.IDView method) node_connected_component() (in module xgi.algorithms.connected) node_edge_centrality() (in module xgi.algorithms.centrality) (in module xgi.stats.edgestats) (in module xgi.stats.nodestats)

node_swap() (in module xgi.generators.randomizing) nodes (xgi.core.dihypergraph.DiHypergraph property) (xgi.core.hypergraph.Hypergraph property) NodeStat (class in xgi.stats) nodestat_func() (in module xgi.stats) NodeView (class in xgi.core.views) normalized_hypergraph_laplacian() (in module xgi.linalg.laplacian_matrix) num_edges (xgi.core.dihypergraph.DiHypergraph property) (xgi.core.hypergraph.Hypergraph property) num_edges_order() (in module xgi.algorithms.properties) num_nodes (xgi.core.dihypergraph.DiHypergraph property) (xgi.core.hypergraph.Hypergraph property) number_connected_components() (in module xgi.algorithms.connected)

O

order() (in module xgi.stats.diedgestats) (in module xgi.stats.edgestats)

out_degree() (in module xgi.stats.dinodestats)

P

pairwise_spring_layout() (in module xgi.drawing.layout) parse_bipartite_edgelist() (in module xgi.readwrite.bipartite)

parse_edgelist() (in module xgi.readwrite.edgelist) pca_transform() (in module xgi.drawing.layout) powerset() (in module xgi.utils.utilities)

R

random_edge_shuffle() (xgi.core.hypergraph.Hypergraph method) random_flag_complex() (in module xgi.generators.simplicial_complexes) random_flag_complex_d2() (in module xgi.generators.simplicial_complexes) random_hypergraph() (in module xgi.generators.random) random_layout() (in module xgi.drawing.layout) random_simplicial_complex() (in module xgi.generators.simplicial_complexes) read_bipartite_edgelist() (in module xgi.readwrite.bipartite) read_edgelist() (in module xgi.readwrite.edgelist) read_incidence_matrix() (in module xgi.readwrite.incidence) read_json() (in module xgi.readwrite.json) remove_edge() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) (xgi.core.simplicialcomplex.SimplicialComplex method) remove_edges_from() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) (xgi.core.simplicialcomplex.SimplicialComplex method)

remove_node() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) (xgi.core.simplicialcomplex.SimplicialComplex method) remove_node_from_edge() (xgi.core.hypergraph.Hypergraph method) remove_nodes_from() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) (xgi.core.simplicialcomplex.SimplicialComplex method) remove_simplex_id() (xgi.core.simplicialcomplex.SimplicialComplex method) remove_simplex_ids_from() (xgi.core.simplicialcomplex.SimplicialComplex method) request_json_from_url() (in module xgi.utils.utilities) request_json_from_url_cached() (in module xgi.utils.utilities) ring_lattice() (in module xgi.generators.lattice)

S

set_edge_attributes() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) set_node_attributes() (xgi.core.dihypergraph.DiHypergraph method) (xgi.core.hypergraph.Hypergraph method) shortest_path_length() (in module xgi.algorithms.shortest_path) shuffle_hyperedges() (in module xgi.generators.randomizing) SimplicialComplex (class in xgi.core.simplicialcomplex) simulate_kuramoto() (in module xgi.dynamics.synchronization) simulate_simplicial_kuramoto() (in module xgi.dynamics.synchronization) single_source_shortest_path_length() (in module xgi.algorithms.shortest_path) singletons() (xgi.core.views.EdgeView method) size() (in module xgi.stats.diedgestats) (in module xgi.stats.edgestats) sources() (xgi.core.diviews.DiEdgeView method) spiral_layout() (in module xgi.drawing.layout) star_clique() (in module xgi.generators.simple) statsclass (xgi.stats.MultiDiEdgeStat attribute) (xgi.stats.MultiDiNodeStat attribute) (xgi.stats.MultiEdgeStat attribute) (xgi.stats.MultiNodeStat attribute)

statsmodule (xgi.stats.MultiDiEdgeStat attribute) (xgi.stats.MultiDiNodeStat attribute) (xgi.stats.MultiEdgeStat attribute) (xgi.stats.MultiNodeStat attribute) std() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) subfaces() (in module xgi.utils.utilities) subhypergraph() (in module xgi.core.globalviews) sum() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method) sunflower() (in module xgi.generators.simple)

T

tail() (xgi.core.diviews.DiEdgeView method) tail_order() (in module xgi.stats.diedgestats) tail_size() (in module xgi.stats.diedgestats) targets() (xgi.core.diviews.DiEdgeView method) to_bipartite_edgelist() (in module xgi.convert.bipartite_edges) to_bipartite_graph() (in module xgi.convert.bipartite_graph) to_bipartite_pandas_dataframe() (in module xgi.convert.pandas) to_dihypergraph() (in module xgi.convert.higher_order_network) to_encapsulation_dag() (in module xgi.convert.encapsulation_dag) (in module xgi.encapsulation_dag)

to_graph() (in module xgi.convert.graph) to_hyperedge_dict() (in module xgi.convert.hyperedges) to_hyperedge_list() (in module xgi.convert.hyperedges) to_hypergraph() (in module xgi.convert.higher_order_network) to_incidence_matrix() (in module xgi.convert.incidence) to_line_graph() (in module xgi.convert.line_graph) to_simplicial_complex() (in module xgi.convert.higher_order_network) trivial_hypergraph() (in module xgi.generators.classic) two_node_clustering_coefficient() (in module xgi.algorithms.clustering) (in module xgi.stats.nodestats)

U

uniform_erdos_renyi_hypergraph() (in module xgi.generators.uniform) uniform_HPPM() (in module xgi.generators.uniform) uniform_HSBM() (in module xgi.generators.uniform)

uniform_hypergraph_configuration_model() (in module xgi.generators.uniform) unique_edge_sizes() (in module xgi.algorithms.properties) update() (xgi.core.hypergraph.Hypergraph method) update_uid_counter() (in module xgi.utils.utilities)

V

var() (xgi.stats.DiEdgeStat method) (xgi.stats.EdgeStat method) (xgi.stats.MultiDiEdgeStat method) (xgi.stats.MultiDiNodeStat method) (xgi.stats.MultiEdgeStat method) (xgi.stats.MultiNodeStat method) (xgi.stats.NodeStat method)

W

watts_strogatz_hypergraph() (in module xgi.generators.random) weighted_barycenter_spring_layout() (in module xgi.drawing.layout) write_bipartite_edgelist() (in module xgi.readwrite.bipartite)

write_edgelist() (in module xgi.readwrite.edgelist) write_incidence_matrix() (in module xgi.readwrite.incidence) write_json() (in module xgi.readwrite.json)

X

xgi.algorithms.assortativity module xgi.algorithms.centrality module xgi.algorithms.clustering module xgi.algorithms.connected module xgi.algorithms.properties module xgi.algorithms.shortest_path module xgi.convert.bipartite_edges module xgi.convert.bipartite_graph module xgi.convert.encapsulation_dag module xgi.convert.graph module xgi.convert.higher_order_network module xgi.convert.hyperedges module xgi.convert.hypergraph_dict module xgi.convert.incidence module xgi.convert.line_graph module xgi.convert.pandas module xgi.convert.simplex module xgi.core.dihypergraph module xgi.core.diviews module xgi.core.globalviews module xgi.core.hypergraph module xgi.core.simplicialcomplex module xgi.core.views module xgi.drawing.draw module xgi.drawing.layout module

xgi.dynamics.synchronization module xgi.encapsulation_dag module xgi.generators.classic module xgi.generators.lattice module xgi.generators.random module xgi.generators.randomizing module xgi.generators.simple module xgi.generators.simplicial_complexes module xgi.generators.uniform module xgi.linalg.hodge_matrix module xgi.linalg.hypergraph_matrix module xgi.linalg.laplacian_matrix module xgi.readwrite.bigg_data module xgi.readwrite.bipartite module xgi.readwrite.edgelist module xgi.readwrite.incidence module xgi.readwrite.json module xgi.readwrite.xgi_data module xgi.stats module xgi.stats.diedgestats module xgi.stats.dinodestats module xgi.stats.edgestats module xgi.stats.nodestats module xgi.utils.utilities module